Better `keras` models for time series and beyond

octoenergy, updated 🕥 2023-02-16 05:33:00

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timeserio

timeserio is the missing link between pandas, scikit-learn and keras. It simplifies building end-to-end deep learning models - from a DataFrame through feature pipelines to multi-stage models with shared layers. While initially developed for tackling time series problems, it has since been used as a versatile tool for rapid ML model development and deployment.

Loosing track of big networks with multiple inputs and outputs? Forgetting to freeze the right layers? Struggling to re-generate the input features? timeserio can help!

complex_network

Documentation and Tutorials

Please see the official documentation on how to get started.

Features

  • Enable encapsulated, maintainable and reusable deep learning models
  • Feed data from pandas through scikit-learn feature pipelines to multiple neural network inputs
  • Manage complex architectures, layer sharing, partial freezing and re-training
  • Provide collection of extensible building blocks with emphasis on time series problems

Installation

pip install timeserio, or install from source - pip install -e .

See Getting Started

Development

We welcome contributions and enhancements to any part of the code base, documentation, or tool chain.

See CONTRIBUTING.md for details on setting up the development environment, running tests, etc.

Issues

Bump werkzeug from 2.0.3 to 2.2.3

opened on 2023-02-16 05:33:00 by dependabot[bot]

Bumps werkzeug from 2.0.3 to 2.2.3.

Release notes

Sourced from werkzeug's releases.

2.2.3

This is a fix release for the 2.2.x release branch.

This release contains security fixes for:

2.2.2

This is a fix release for the 2.2.0 feature release.

2.2.1

This is a fix release for the 2.2.0 feature release.

2.2.0

This is a feature release, which includes new features and removes previously deprecated features. The 2.2.x branch is now the supported bugfix branch, the 2.1.x branch will become a tag marking the end of support for that branch. We encourage everyone to upgrade, and to use a tool such as pip-tools to pin all dependencies and control upgrades.

2.1.2

This is a fix release for the 2.1.0 feature release.

2.1.1

This is a fix release for the 2.1.0 feature release.

2.1.0

This is a feature release, which includes new features and removes previously deprecated features. The 2.1.x branch is now the supported bugfix branch, the 2.0.x branch will become a tag marking the end of support for that branch. We encourage everyone to upgrade, and to use a tool such as pip-tools to pin all dependencies and control upgrades.

Changelog

Sourced from werkzeug's changelog.

Version 2.2.3

Released 2023-02-14

  • Ensure that URL rules using path converters will redirect with strict slashes when the trailing slash is missing. :issue:2533
  • Type signature for get_json specifies that return type is not optional when silent=False. :issue:2508
  • parse_content_range_header returns None for a value like bytes */-1 where the length is invalid, instead of raising an AssertionError. :issue:2531
  • Address remaining ResourceWarning related to the socket used by run_simple. Remove prepare_socket, which now happens when creating the server. :issue:2421
  • Update pre-existing headers for multipart/form-data requests with the test client. :issue:2549
  • Fix handling of header extended parameters such that they are no longer quoted. :issue:2529
  • LimitedStream.read works correctly when wrapping a stream that may not return the requested size in one read call. :issue:2558
  • A cookie header that starts with = is treated as an empty key and discarded, rather than stripping the leading ==.
  • Specify a maximum number of multipart parts, default 1000, after which a RequestEntityTooLarge exception is raised on parsing. This mitigates a DoS attack where a larger number of form/file parts would result in disproportionate resource use.

Version 2.2.2

Released 2022-08-08

  • Fix router to restore the 2.1 strict_slashes == False behaviour whereby leaf-requests match branch rules and vice versa. :pr:2489
  • Fix router to identify invalid rules rather than hang parsing them, and to correctly parse / within converter arguments. :pr:2489
  • Update subpackage imports in :mod:werkzeug.routing to use the import as syntax for explicitly re-exporting public attributes. :pr:2493
  • Parsing of some invalid header characters is more robust. :pr:2494
  • When starting the development server, a warning not to use it in a production deployment is always shown. :issue:2480
  • LocalProxy.__wrapped__ is always set to the wrapped object when the proxy is unbound, fixing an issue in doctest that would cause it to fail. :issue:2485
  • Address one ResourceWarning related to the socket used by run_simple. :issue:2421

... (truncated)

Commits
  • 22a254f release version 2.2.3
  • 517cac5 Merge pull request from GHSA-xg9f-g7g7-2323
  • babc8d9 rewrite docs about request data limits
  • 09449ee clean up docs
  • fe899d0 limit the maximum number of multipart form parts
  • cf275f4 Merge pull request from GHSA-px8h-6qxv-m22q
  • 8c2b4b8 don't strip leading = when parsing cookie
  • 7c7ce5c [pre-commit.ci] pre-commit autoupdate (#2585)
  • 19ae03e [pre-commit.ci] auto fixes from pre-commit.com hooks
  • a83d3b8 [pre-commit.ci] pre-commit autoupdate
  • Additional commits viewable in compare view


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Bump ipython from 8.1.1 to 8.10.0

opened on 2023-02-11 01:40:06 by dependabot[bot]

Bumps ipython from 8.1.1 to 8.10.0.

Commits
  • 15ea1ed release 8.10.0
  • 560ad10 DOC: Update what's new for 8.10 (#13939)
  • 7557ade DOC: Update what's new for 8.10
  • 385d693 Merge pull request from GHSA-29gw-9793-fvw7
  • e548ee2 Swallow potential exceptions from showtraceback() (#13934)
  • 0694b08 MAINT: mock slowest test. (#13885)
  • 8655912 MAINT: mock slowest test.
  • a011765 Isolate the attack tests with setUp and tearDown methods
  • c7a9470 Add some regression tests for this change
  • fd34cf5 Swallow potential exceptions from showtraceback()
  • Additional commits viewable in compare view


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Bump cryptography from 36.0.2 to 39.0.1

opened on 2023-02-08 03:05:08 by dependabot[bot]

Bumps cryptography from 36.0.2 to 39.0.1.

Changelog

Sourced from cryptography's changelog.

39.0.1 - 2023-02-07


* **SECURITY ISSUE** - Fixed a bug where ``Cipher.update_into`` accepted Python
  buffer protocol objects, but allowed immutable buffers. **CVE-2023-23931**
* Updated Windows, macOS, and Linux wheels to be compiled with OpenSSL 3.0.8.

.. _v39-0-0:

39.0.0 - 2023-01-01

  • BACKWARDS INCOMPATIBLE: Support for OpenSSL 1.1.0 has been removed. Users on older version of OpenSSL will need to upgrade.
  • BACKWARDS INCOMPATIBLE: Dropped support for LibreSSL < 3.5. The new minimum LibreSSL version is 3.5.0. Going forward our policy is to support versions of LibreSSL that are available in versions of OpenBSD that are still receiving security support.
  • BACKWARDS INCOMPATIBLE: Removed the encode_point and from_encoded_point methods on :class:~cryptography.hazmat.primitives.asymmetric.ec.EllipticCurvePublicNumbers, which had been deprecated for several years. :meth:~cryptography.hazmat.primitives.asymmetric.ec.EllipticCurvePublicKey.public_bytes and :meth:~cryptography.hazmat.primitives.asymmetric.ec.EllipticCurvePublicKey.from_encoded_point should be used instead.
  • BACKWARDS INCOMPATIBLE: Support for using MD5 or SHA1 in :class:~cryptography.x509.CertificateBuilder, other X.509 builders, and PKCS7 has been removed.
  • BACKWARDS INCOMPATIBLE: Dropped support for macOS 10.10 and 10.11, macOS users must upgrade to 10.12 or newer.
  • ANNOUNCEMENT: The next version of cryptography (40.0) will change the way we link OpenSSL. This will only impact users who build cryptography from source (i.e., not from a wheel), and specify their own version of OpenSSL. For those users, the CFLAGS, LDFLAGS, INCLUDE, LIB, and CRYPTOGRAPHY_SUPPRESS_LINK_FLAGS environment variables will no longer be respected. Instead, users will need to configure their builds as documented here_.
  • Added support for :ref:disabling the legacy provider in OpenSSL 3.0.x<legacy-provider>.
  • Added support for disabling RSA key validation checks when loading RSA keys via :func:~cryptography.hazmat.primitives.serialization.load_pem_private_key, :func:~cryptography.hazmat.primitives.serialization.load_der_private_key, and :meth:~cryptography.hazmat.primitives.asymmetric.rsa.RSAPrivateNumbers.private_key. This speeds up key loading but is :term:unsafe if you are loading potentially attacker supplied keys.
  • Significantly improved performance for :class:~cryptography.hazmat.primitives.ciphers.aead.ChaCha20Poly1305

... (truncated)

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Bump oauthlib from 3.2.0 to 3.2.2

opened on 2023-02-06 21:55:08 by dependabot[bot]

Bumps oauthlib from 3.2.0 to 3.2.2.

Release notes

Sourced from oauthlib's releases.

3.2.2

OAuth2.0 Provider:

  • CVE-2022-36087

3.2.1

In short

OAuth2.0 Provider:

  • #803 : Metadata endpoint support of non-HTTPS

OAuth1.0:

  • #818 : Allow IPv6 being parsed by signature

General:

  • Improved and fixed documentation warnings.
  • Cosmetic changes based on isort

What's Changed

New Contributors

Full Changelog: https://github.com/oauthlib/oauthlib/compare/v3.2.0...v3.2.1

Changelog

Sourced from oauthlib's changelog.

3.2.2 (2022-10-17)

OAuth2.0 Provider:

  • CVE-2022-36087

3.2.1 (2022-09-09)

OAuth2.0 Provider:

  • #803: Metadata endpoint support of non-HTTPS

OAuth1.0:

  • #818: Allow IPv6 being parsed by signature

General:

  • Improved and fixed documentation warnings.
  • Cosmetic changes based on isort
Commits


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Bump wheel from 0.37.1 to 0.38.1

opened on 2022-12-26 22:06:02 by dependabot[bot]

Bumps wheel from 0.37.1 to 0.38.1.

Changelog

Sourced from wheel's changelog.

Release Notes

UNRELEASED

  • Updated vendored packaging to 22.0

0.38.4 (2022-11-09)

  • Fixed PKG-INFO conversion in bdist_wheel mangling UTF-8 header values in METADATA (PR by Anderson Bravalheri)

0.38.3 (2022-11-08)

  • Fixed install failure when used with --no-binary, reported on Ubuntu 20.04, by removing setup_requires from setup.cfg

0.38.2 (2022-11-05)

  • Fixed regression introduced in v0.38.1 which broke parsing of wheel file names with multiple platform tags

0.38.1 (2022-11-04)

  • Removed install dependency on setuptools
  • The future-proof fix in 0.36.0 for converting PyPy's SOABI into a abi tag was faulty. Fixed so that future changes in the SOABI will not change the tag.

0.38.0 (2022-10-21)

  • Dropped support for Python < 3.7
  • Updated vendored packaging to 21.3
  • Replaced all uses of distutils with setuptools
  • The handling of license_files (including glob patterns and default values) is now delegated to setuptools>=57.0.0 (#466). The package dependencies were updated to reflect this change.
  • Fixed potential DoS attack via the WHEEL_INFO_RE regular expression
  • Fixed ValueError: ZIP does not support timestamps before 1980 when using SOURCE_DATE_EPOCH=0 or when on-disk timestamps are earlier than 1980-01-01. Such timestamps are now changed to the minimum value before packaging.

0.37.1 (2021-12-22)

  • Fixed wheel pack duplicating the WHEEL contents when the build number has changed (#415)
  • Fixed parsing of file names containing commas in RECORD (PR by Hood Chatham)

0.37.0 (2021-08-09)

  • Added official Python 3.10 support
  • Updated vendored packaging library to v20.9

... (truncated)

Commits
  • 6f1608d Created a new release
  • cf8f5ef Moved news item from PR #484 to its proper place
  • 9ec2016 Removed install dependency on setuptools (#483)
  • 747e1f6 Fixed PyPy SOABI parsing (#484)
  • 7627548 [pre-commit.ci] pre-commit autoupdate (#480)
  • 7b9e8e1 Test on Python 3.11 final
  • a04dfef Updated the pypi-publish action
  • 94bb62c Fixed docs not building due to code style changes
  • d635664 Updated the codecov action to the latest version
  • fcb94cd Updated version to match the release
  • Additional commits viewable in compare view


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Bump certifi from 2021.10.8 to 2022.12.7

opened on 2022-12-08 14:16:09 by dependabot[bot]

Bumps certifi from 2021.10.8 to 2022.12.7.

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